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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE14102
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLVAIFLV QLCFVAVGAA IPNCPDLDVL ENQSDLSQDD LNNLILCFCK PDDKEKVVIS  60
   61 CLYGSNLDHL MKATEAVKNA SLITSSISIQ HMEFPDGGLP EFGKLAPDLK SLEIKECSGQ 120
  121 DELKVGDDSF KGLEQTLRNL TIHACNLQTI PPSVDSLENL ETVVFSNNKL DSLGVDQFKN 180
  181 KKQLSYLDVS GNFITSIEEK AFEPLTSLET LVIGEHNFIN ETVVEEIGRL KALKTLDLSR 240
  241 ADGIFQPPET LFKEIPQIEV LKLSGCSIPT LEPGQFATLK KLKELDLRVN LIENITAYAF 300
  301 DGLESLTRLS LAGNFISKLE PDVFFGLSSL EELDLGWNEI KTIPTDVFKP LTDKLKTISL 360
  361 RNNPISELPS TGLGMLEKLS LAECGFTSIS ADQLKDYPKL EELDLSKCNI SNIVENTFEN 420
  421 QKDSLKKLNL QKNKLKSLPN LIKNLPAIES LDVSSNPYRC DGELVNFVFG VEDRVKKAEE 480
  481 NGNSFFVANT NETVCDRPYT LRGEQILQVE VEKFQPYDEK SDTTTAPSTT TTSTVEETTT 540
  541 ELKIPDLLVG SRTNDTLFKE EPRRDVYDLS KTDDAKGVYN QKGTYAVPIT IGAIGLVTVI 600
  601 VIVAVVLFIK KNKKVGTETA KGGKSDKVVK MEDGMVEIEL DSQPGTQHAT PRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle