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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NB5R4_MOUSE
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNVPSQAFP APGSQQRVSS QGRSKVPLKQ GRSLMDWIRL TKSGKDLTGL KGGLIEVTEE  60
   61 ELKKHNKKED CWICIRGFVY NVSPYMEYHP GGEDELMRAA GADGTDLFNE VHRWVNYESM 120
  121 LKECLVGRMA VKPAVPKDCH EGKRVLNGML PKSQMSDTLP RDVTDTLPRD VTDTLPREGL 180
  181 SSPSYDWFQT ESSVTIVVYT KQKNISLDSV IVDLQDDSLR AEAVIKDHSY LVHVGLSHEV 240
  241 QENFSVRVIE NVGKIEIVLQ KKESVSWQCL GDHLEKHDSF IPKKDTGLYY RRCQLISKED 300
  301 VTHDTRLLCL MLPPSTHLQV PVGQHVYLKL SVTGAEIVKP YTPVSDSLLS DFKEPVLSPN 360
  361 KYIYFLIKIY PAGLFTPELD RLQIGDFISV SGPEGNFKVS KLQEVEDLFL LAAGTGFTPM 420
  421 VTVLNYALSH MSSLRKVKLM FFNKTEDDII WRCQLEKLAL REKRFDVEFV LSAPSPEWNG 480
  481 KQGHISRALL SEFLQRSSEN SRAFLCICGP TPFTDEGIRL LHDLNFSDDE IHGFTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle