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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NDC1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLSSVSSL IPFSYGATRL TSKASLASRT SGFNLSSRWN STRNSPMLYL SRAVTNNSGT  60
   61 TEISDNETAP RTYSWPDNKR PRVCILGGGF GGLYTALRLE SLVWPEDKKP QVVLVDQSER 120
  121 FVFKPMLYEL LSGEVDVWEI APRFSDLLTN TGIQFLRDRV KTLLPCDHLG VNGSEISVTG 180
  181 GTVLLESGFK IEYDWLVLAL GAESKLDVVP GAMELAFPFY TLEDAIRVNE KLSKLERKNF 240
  241 KDGSAIKVAV VGCGYAGVEL AATISERLQD RGIVQSINVS KNILTSAPDG NREAAMKVLT 300
  301 SRKVQLLLGY LVQSIKRASN LEEDEGYFLE LQPAERGLES QIIEADIVLW TVGAKPLLTK 360
  361 LEPSGPNVLP LNARGQAETD ETLRVKGHPR IFALGDSSSL RDSNGKILPT TAQVAFQEAD 420
  421 FTGWNIWAAI NNRPLLPFRF QNLGEMMTLG RYDAAISPSF IEGLTLEGPI GHAARKLAYL 480
  481 IRLPTDEHRF KVGISWFAKS AVDSIALLQS NLTKVLSGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle