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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE12666
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPATKAIGL LLVIIGLAAG VQYEIRGNID LINSYDIHPD YYNEKSFTEK LNKVSERFSQ  60
   61 VVGPDFKEFF VHDYKIHGQD TAVFHARLTL VSSLTVSRQD IIDQIVATDD VQIYFLRKNE 120
  121 FEVQGDSVSR FRVVRADVSN CLHGGILLPN ATCSCLPYYS GANCEVVTCR NNGIGSSGRC 180
  181 SCPPGLYSAH CEARTCVTKI DSVVDFSSQS LIIAINTRTS MAYDLSMIIE NIPTLVTDYQ 240
  241 SQGVILSSFI VTVYRYTKSV YFMETSAFTT SDAMIDYLHS VTIAPSSDDQ PLLDAIANSQ 300
  301 STQPTMRPKS TVYVFADSEN LLDPTPSTLL SSTNESMVIQ QTLAWRNKII FVLSQTTSSP 360
  361 IEPTGNHFDV LRRVATAAHG DILMIDKTEI VEVLTHLLFY TIGGQNTYVQ YYNNVAKNIP 420
  421 VQSDTPTQTT YIMMTVENGE SLPNIQDTNG NTLKPTSSGR RFAVYRVFQS STTSVTITGD 480
  481 TIPLHNTRVW FTSMDDVLVS YSEDDTVDNN YAHTFNGYYQ RPSLYSSFAT TTSLSVSTAN 540
  541 SVTSGYQIAN ATSCTPGPYV HNVVVSASDG NKYRAVPGYC FTPDSHMAAP WSCLNNGTRS 600
  601 GISTCSCTAN WGGLHCEVPK CVNGGSPDKF PNGGGHGNCI CPFGVSGSFC EILTCSTTSP 660
  661 DTFQSYNRSF AVVVQNSLSA NQALVRLNDG LRAMLNQGQS NDFEDFVLTT FKARTVNGAS 720
  721 FPDVSSSKFS SASAFLNATN DIGIGYSYSP SGPQPGLFAL ETTMRSMDFD KSSIFFFTDS 780
  781 ASSVVEASMN FSDIVQTAVE RQIEISVVII PPYGSTDFCT DIGTYEIYEI LAQQTGGNFI 840
  841 NFCQPYTTNG DPVFNFIASY GSTHHHTEVV AYYNVMDCSL FASRSFYISS ATNDAYVVVY 900
  901 SPTIQNFTAS VTNNGVSQSL VADSHSVPFF ASYQIKISAG SSLQYVLQLS SNTKAQCFVR 960
  961 ITERSQFSAY LGFSPDPSFD RFSRDLTYAT HQQPVIHLSS TLQSDPSIDV TSYDNNNNIA1020
 1021 FTSLFTKRTS GCKYEYIMNQ EYTCQSAGDT FTMETTITTN EVTIMRTQRA YCSDLIGCIN1080
 1081 GGIMLGGNCQ CVNGYTSLHC EVPTCQNGGS VVDFKCQCPS IYDGDSCQYT TCNTWNFVET1140
 1141 HDPREYNFQQ IVFVVEINTK NMILPNSYLL KNIQAFVDST DDVNVPKQYT LVTFDDTNIK1200
 1201 VVASSTRKDV FLAAFQKGIT VSVNSPTKVR GLEAINTAYA TLVDLPGIVY VFTATNSASN1260
 1261 LDAVRQRYGV QVNMIWMGAD LTPVNVNYYY AAIARQSNGR VLPVSPLQTQ QILSALTPTV1320
 1321 NENQLILDDA AKDCSAGVNF QFPVGSLATT LTLVATGTGV SVTVTDEKSN NVDLTNSTTF1380
 1381 TDVNTLIRTI STSGHNAGTW SVTVKSTGSC YLQARVNSPL QIIPRFTNDQ GDDFGSGTPR1440
 1441 VGAGSTSASY ITFRVMDSYN SDSHNFGSTI LTVSSANTDP ETPWETGIFT NATVLVRDPV1500
 1501 NCASQFVTPL ITWTSTYMKF VVRGKDSNNN DYQRTFFFNK SGNKADCMNS ATVDTYGFCQ1560
 1561 CDANHFGNLC QLRKCTNGGV SAYGLCDCPN GYYGDYCEQY ISA

YRC Informatics Platform - Version 3.0
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