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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-14
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGASALDPP AFVRLLNRLF RQCGLFVADN DKAVLIVTLL LTAFCSSKIC FTKQEDDIKT  60
   61 GYTPVGARSL DEIEVFSDFF ASTGDPIAVF LFITAKDNSS MADYNTMKEV VDIMDYVGSN 120
  121 LTHKGESFYT LCTDFCQINE PVRQYYNGLA MKQQNLSEVG SRFQLTFPMM QVLGKELDLS 180
  181 PNFFGVKTDE DGNVEYVKII MLQIRANIPN DWKKEDAAEY ERMISQYFHF KYDSTHVTPL 240
  241 AMSLTYTGDE VVRTGLTIFP FIGVGFIIMT TFSIITIYYS SSRLDQWSVH KVSEAILACV 300
  301 CPLLATSSAL GTLFWFGFRF GTILCVTPFL ILAIGVDDAY LQVHACMRLT AEDSSMTKRE 360
  361 KIARMLVEVG PSIAITSMTN LFAFLVGIYT PTPEISLFCA GNAVAILFDF IYQITMYTAI 420
  421 LSICENLEMR KNATKRKDSG LSFKNEQFTV MLDSYCDWVA NAYTHLLVLF CFIVYIFVSI 480
  481 RGALNINIIL SPDKLVIGDS PLLQVNYLRD QFVLPNYTTV NIFVQNPGNL TIQSNLDYMN 540
  541 SLFDSFESYP ECLGKKFSHY FVRDYESFRE SSLEEMEMME DEEGDTNKTA LEPFSKAAMS 600
  601 EFLAWPEFQH WNGFVKFDKN GMLSKYWATV SYHGEGLGDF QVRRRMLNRW RATADQFAPL 660
  661 NVSIFDDYAP FVDTLETILP ATISTSVCTL ICMMIVCFLF MYNVFTVFVA TLAITSICIG 720
  721 VFGFLSMWGI DLDPISMACL IMSIGFSVDF PAHITFHYFR EGLHDPQSTP AKRVARSLAA 780
  781 IGFPLLQCGL STILFVLCLL FVPTYMGEVF VKTMILVVTL GLIHGLFIVP AFLCAFTAIH 840
  841 QTCFSSSRVA HSQSFSSLAK LFSWRISPST SDNKISA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle