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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE12592
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTTLTCLYI LATISSAVYG AVTDETRQAV QEALFEALNT VDSSFSSEPS VADGAIVSSQ  60
   61 IANAESKQLQ FTGDVLEIAT QILVKKYGVD ILEDANEVLT ELNAGESSAR KKRSVDEVEQ 120
  121 ESFVANLRQK RQSRGKRQGG GGGGRGGGGG GRGGDGGRSG EQDGRKKRNS GEQQGGGGRT 180
  181 EYSPPKSNAT CQGPPKSCSD PVHDRIRSIT GYCNNRGKPT QANSVTAIRR LLGTTSYTDG 240
  241 LQAIRNTSVT GSPLPSTRLI SNKLHDEGST PNFSPSVNHL HMQIGQFIAH DIIFMPSSTA 300
  301 KDGSSLNCTS CSSPTTISTN CAPIPAPADD KYFTPVSRTE ARCIRLTRAL NGQSGFGVRT 360
  361 QIDQNSHYLD MSAVYGSSDC EARTVRSFQN GLLLTNTGIG YVLPPQAPND TNCQSTNPYY 420
  421 CFTAGDFRNC LHPGLLPLHI VFIKEHNRLA VKVKAAQPSW NDEQIYQFVR KIMVAQWQQI 480
  481 VYNEYLPKLL TDKYLTDFNL KPMKPGAGPF QGYSTSMNAA LSGEFAAAAF RFGHSQSRQD 540
  541 FARQDATNKT IGAYDLGNNI FYADQVYQKS LGGSETMLLG LIKTAGMQVD RYFSFPIRNQ 600
  601 LFEIRGKNGS GVDLISVNIM RGRDVGLMPY VKYRTLVGLS PVDTWNDLSS TFTAANLAAL 660
  661 KTVYADPADI DLYTGLVMET PLAGGQLGPT ASWIIAEQFR ALKTGDRFYY ENGVANTVGF 720
  721 TPTQIDAIRR VKLAKIFCEN TAIITSINTD IFDLNSSQVA CSSIPDIDIR LFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle