YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ent-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	33	0.90
Transmembrane Helix	34	54	0.86
Non-Cytoplasmic	55	94	0.80
Transmembrane Helix	95	113	0.71
Cytoplasmic	114	121	0.63
Transmembrane Helix	122	142	0.92
Non-Cytoplasmic	143	147	0.72
Transmembrane Helix	148	169	0.89
Cytoplasmic	170	183	0.72
Transmembrane Helix	184	206	0.82
Non-Cytoplasmic	207	217	0.69
Transmembrane Helix	218	238	0.95
Cytoplasmic	239	281	0.81
Transmembrane Helix	282	303	0.89
Non-Cytoplasmic	304	320	0.81
Transmembrane Helix	321	342	0.87
Cytoplasmic	343	352	0.74
Transmembrane Helix	353	373	0.84
Non-Cytoplasmic	374	384	0.67
Transmembrane Helix	385	405	0.93
Cytoplasmic	406	420	0.70
Transmembrane Helix	421	444	0.87
Non-Cytoplasmic	445	450	0.61

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAVELQPL NEAKKVEDAE VEEETPEPED KGNLVFYIIL LHGIGTLMPW NMLITISYDY  60
   61 FESYKMLANS TIDMDTGKVT GDPTVYSSNF QSFQTIASQV PNLLLNLLNI FIVVKGGLAG 120
  121 RITVGLSIVA VCVITTMIFI YVETSTWLTG FFTLTIITII VLNGANGVYQ NSIFGLASEL 180
  181 PFKYTNAVII GNNLCGTFVT LLSMSTKAVT RNILDRSFAY FSIALITLVF CFISFHILKK 240
  241 QRFYQFYSTR AERQRAKNEE AADNEGKMAN YIATFKEAFP QLINVFLVFF VTLSIFPGVM 300
  301 MYVKDEKKGG TYDFPLPQNY FMDVTTFLQF NVFAFIGSIV AGRKQWPAPN KLWIPVYLRL 360
  361 LYIPFFIFCN YLPETRTLPV FFESTWLFII VAASMSFGSG YFSGLSMMYT SKTVDPSKAQ 420
  421 VAGMMAGFFL ISGIVSGLIF TMVIKFVVTA