YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	acdh-3
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSRSLLI SRSAAPVVAT MSTKPRAHID GHVPSPLQQL SEEESSIVGT VRRFAVNVIK  60
   61 PLVREMDDKS QMHQSVITGT FENGLMGIEI PEKYGGPGSS FFDAVLVIEE LAKVDPSVSV 120
  121 FVDVQNTLVA PLIIQLGTEE QKQKYLPKIV TEAIGSFALS ETGSGSDAFA LKTTAKKDGD 180
  181 DFVISGSKMW ITNAGHAQFF LVFANADSAK GYKGITCFLV DRNQEGVSVG KKEDKLGIRA 240
  241 SSTCSVHFDN VRVHKSSILG EYGKGYKYAI ECLNAGRIGI GAQMLGLAQG CFDQTIPYLQ 300
  301 QREQFGQRLI DFQGMQHQIG QTRMEIEAAR LLVYNAARMK QNGLPFVREA AMAKLFASQV 360
  361 ATTATSKCVE WLGGVGFTKE FPVEKFYRDS KIGTIYEGTS NIQLNTIAKL VDIEYQQKA

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	419	0.99