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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dct-17
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARFVAFLL ITSNLIILSK TDDDFTCPTI HITKDTGMTG AIPAGATSMT KIPAGTDCTY  60
   61 IFDIPKGFAI KMETSAVYDV SPGDSIKFDY FYISSPAEKE VEYAVNQTLP YEVISKTGNL 120
  121 TFFATYTYID MTNYQQVIKP TGTYFNATLE TDKYFTVQAA DNDQVVLKYG SRQTGFVDTS 180
  181 IYEVFVFDGN DILNSKYLGR LTELYRRPQY DVSSTSNTLT LLDLYGMPSD SLLLGNDAST 240
  241 VENMGQYSVF VIDSDKELDG YMGNYELEPD SWYTFICNDC SSFTIGAMTF DRKFENASGY 300
  301 IEVQGMSPTQ KLQPVLKYPY STNSNSSFPQ LIPSPMATFH IHNASVTFVV KPGVPQNDFA 360
  361 AAPGQSRSVY SPQIWNPAAE PKFDYTFSDP VKVYNFSINL QTVKLENDGD ELDVQVGSVD 420
  421 GLTTLDKKYN KDTKSDAYLS GIGRYLNLKY TGSKTSEVIL NFVMIDRLNP DGTTQSPGTT 480
  481 VVPSGSFSTA PIVTSVSTRA TRVSSSTAPV VSTVTSTITS QSIVTTNKSS SPITSKTTTS 540
  541 INVSSSTTKS TRPMQSTTTY QKLAQASSTA STTPIPITTQ NISTASIATP STKTPITPSL 600
  601 ITTRSSTTKL SPIVITKSSL AYTATPTSAA PSTSALTITT HTTPIPGVLT SKTTSKTVDL 660
  661 TTATQSVQTP ISTDPILHHT TPSSFTIGTT QFFTEISTVN PKRLTGSTAT SVHVETTTKG 720
  721 TSSLFSAGFL IIVISALTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle