YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE09620
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLVSRSTL LNASRCFSRT AEASAKQTCL IETHKKHGGK LVEFAGYDMP TQYADFSIKE  60
   61 STIHTRKHVS LFDVSHMLQT YITGKDRVAF IESLTTADVQ GLQENSGTLS VFTNEKGGIK 120
  121 DDLIIMKTDK DFLFLVTNAG CIEKDLPYLQ ENAAAWRSKG KDVKIETLDN RGLVAVQGPE 180
  181 MAKVLQEGTD IDLSKLTFMK TTVGKVFGID GCRVTRCGYT GEDGVEISVD PTKAEQLVER 240
  241 LLASQAGSVK LAGLGARDAL RLEAGLCLYG SDIEENTTPI EAGLAFVVAK RRRETLDFPG 300
  301 AEHIVKQLKE KSWPKRRVGL LAPAGRCPRS HLPLIDPLDK CSIGFVTSGC PSPTLGKNIA 360
  361 IAYVDKSHSK IGTKFVVDFG AKQAPVEVVK MPFVPTNYFT GK

Type	Start	End	Confidence
Signal Peptide	1	23	0.65
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	402	0.99