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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE09454
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKDKLANP LIALVVFLVL TIIALLATII IMKLNEKPVE PPRVAPIAQK LVAPEKKSRP  60
   61 EPVTNPVTMT RPEPVTQASK PRNVCETPGC VTLADQLLNF QDPSVDPCQD FYKAACGKYS 120
  121 EHEVANRRLQ KKDIIIQRMI KNFLLKNETS ESKSENVMRQ VYRTCEGLKN EEIFNANMKT 180
  181 AFRELFKDIQ KIGSWPAADK NWDETKLNLN EMLLNIVKLG SSNFGLFQIR PTEVPFLEVA 240
  241 PDMARSPKVS ANFQQIIFDI LEKNGLQPDE NVIADDVEDY ITLEETLSQY AYDYNAEKVQ 300
  301 FSKLQAQVPS LKLEKIIEEM MNPNRKKLLV TKVKPRMVAH KHSLFFDEKM NLEKLLKSTP 360
  361 KRTLANYLIF YYMDHAMNGL SVHDNVIKKR NCEKLVIEYL PKASLRVFVR NHFEKGNLKI 420
  421 VDEMAEETKK SFIEMLQEST WLGADSKKNA ILKLEKMGKM IGYPKEFEKK GALDKMFETL 480
  481 KLLPKDTLYG ILKKIGRFHM EQGIEFVALE TPMDPVLPVL MTNAFYTDRN HLSFLVGYMD 540
  541 DPLFDATYPK YVNIALTGNI LAHETSHGFD TAGIKRDENG EVRSWMKPED LKEYGKKTQC 600
  601 LVDQYNEYDD PVFGKNLNGT TTLNEMVADM IGVTVAWKVF EKLDSSKEQK VIGFENENID 660
  661 KLYFRAAALD FCSLPPTTSL VEELTRVHPT GNFRVNGIFS NMPQFATAFN CPEGSPMNPK 720
  721 TRCSIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle