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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pgl-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSDLRVSK RTTRRERGSC NFDLVPIFFS VFLLFWFHPF HMEANKREIV DFGGLRSYFF  60
   61 PNLAHYITKN DEELFNNTSQ ANKLAAFVLG ASKDAPGDED ILEMILPNDA NAAVIAAGMD 120
  121 VCLLLGDKFR PKFDAAAEKL SGLGHAHDLV SVIDDDKKLG MLARKAKLKK TEDAKILQAL 180
  181 LKVIAIDDAA EKFVELTELV SQLDLDFDVY VLTKILGLIS EETSDEVDII RDNVVNAFDS 240
  241 CKPLLKQLML DGPKSEPADP FISLLMDPLE ESVGKVVNHI AQLFEEASKN EGDESLVLRS 300
  301 QLGYQLFFLI VRSLADGKRE VSKKILSGIP TSVRAEVFPG LQRSVYKSAV FLGNHIIQVL 360
  361 LGSKKSFEDW DVVGVAKDLE SAWKRRAIAE LIKKFQVSIL EQCFDKPVPL IPQSPLNNDA 420
  421 VIDNVNKALQ FALWLTEFYG SENETEALGE LRFLDSTSKN LLVDSFKKFV QGINSKTHVT 480
  481 RIVESLEKCC LSDTPSGRKS NVQPSTSQQQ DSAYTKEEMT TVHNTYSVNT KAQVLNGLSD 540
  541 TNSSGLLVDS KDSLSLQEIS CDEVDSSTLL SSSRNIGEGV TVKAVDPVPE KVNDAQQQQT 600
  601 VNEIEMASDA NQDTSSSASP EVAPSFSTDG WDSPTKSVAL PPGMQQIDEE ETTVADKDST 660
  661 PQPQARAETA WGSGDATPMP LPAPTNQYKV SGFGEAKVAK GFGQFAPTSS AYGGGGGRGG 720
  721 YGGGDRGGRG GYGGDRGGRG GYGGGDRGGR GGYGGDRGRG GYGGRGGRGG F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle