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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pccb-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRFARQLA LPVFNGVLHP TRATSSIAHT IKVAHKIDET REKALLGGGK KRVDAQHARG  60
   61 KLTARERIDL LLDRNTFREY DMFAEHTCND FGMQKEKYPG DSVVTGRGEI NGRTVFVFSQ 120
  121 DFTVFGGSLS SIHAKKIVKI MREAMLVGAP VIGLNDSGGA RIQEGVESLA GYADIFQENV 180
  181 MASGVVPQIS MIMGPCAGGA VYSPALTDFT FMVRDTSYLF ITGPDVVKAV TNEEVTQEEL 240
  241 GGAKTHTVTS GVAHGAFDND VDALMSLREL FNYLPLSNTD AAPIRAAEDP WDRAVPSLDT 300
  301 VVPLESTAAY NMKDVVHALV DEGDFFEIMP DYAKNLVIGF ARMNGRTVGI VGNNPKFAAG 360
  361 CLDINSSVKG ARFVRFCDAF NIPIITLVDV PGFLPGTAQE YGGIIRHGAK LLYAFAEATV 420
  421 PKITIITRKA FGGAYDVMSS KHLRGDINYA WPTAEVAVMG AKGAVSILFR NDKEHAVQHE 480
  481 EEYTELFSNP FPAAVRGFVD DIIIPSETRK KVCEDLNMLE SKKLKNPWKK HGNIPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle