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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: vit-2
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSIIIASLV ALALASSPAF ERTFEPKTDY HYKFDGLVLS GLPSASSELS QSRISARARI  60
   61 QAVDDRYIHL QLVNIRMAAS HLPESEQMPS LNSMEQRELS EEYKQMLELP LRAQLRNGLI 120
  121 SELQFDKEDA EWSKNMKRAV VNMISFNPIA PRNEIEKIES SYDKEEQSEE NTSFFTNEKT 180
  181 LEGDCQVAYT VIREQKKTII TKSINFDKCT ERSEIAYGLR YSSECPECEK DTELIRPQTV 240
  241 YTYVLENEEL KESEVRSLYT VNVNGQEVMK TETRSKLVLE ENHSIKSHIK KVNGEKESII 300
  301 YSSRWEQLVE DFFKNGDKAE FAPFEKFPLD KKMHLIKTIT EQIQEVENNM PETSHFLARL 360
  361 VRIFRTTSTS QLKEIHETLY VKADKKIQSL MEHALAIAGT KNTIQHILVH MENEDILPLG 420
  421 QILKTIQETP FPSQSIAEAL IKFAESRVAK NNLVVRQAAW LAAGSVVRGI VDYKNIRPLV 480
  481 REDKRELKEK FLRVFMQQYK DAETTYEKIL ALKTIGNAGL DISVNQLNEI IVDKRQPLPV 540
  541 RKEAIDALRL LKDTMPRKIQ KVLLPIYKNR QYEPEIRMLA LWRMMHTRPE ESLLVQVVSQ 600
  601 MEKETNQQVA ALTHQMIRHF AMSTNPCYQR VAIVCSKVLS FTRYQPQEQM IASSYAQLPL 660
  661 FLQNSFSGAQ FDFAAIFEKN SFLPKDLHAS LDAVFGGNWN KYFAQIGFSQ QHMDKYVQMA 720
  721 LEKLESLEKE STTVVRGRRI QTGIKLLKEL AQKMNIRARP ATYTEKDAFA MVYLRYKDMD 780
  781 YAFLPIDRQL VENLIEKFTS NGKVQFSEIR RLLNQELEFE THHAAYFYEA IRKFPTTLGL 840
  841 PLTISGKIPT VISAEGQFSL ELEGTELRLT VEARPSVAAT HVYEMRMFTP LFEQGVKSVQ 900
  901 SVRAYTPIKI QAVAGMKRNF EIVYKVVVPE NQKSIVSLTT RPVVFLRFPG FSKFEYIEAE 960
  961 ERTVVVPQWQ QKTQEIEKVF NFLGLEVSTR GNILNQHTLE NWLLAEQDFE VSVENKNRPA1020
 1021 EFTARLTVGQ LEKTELSQIK YNKIFEKEFE LEQENTESRR EYFNKMVKNI QKEQGYKSVI1080
 1081 SLKLEAPRDY TMNTELTTVC DKQVRMCQWE VEIRRSPILE ETKEWTLRSQ LLVVRPEMPS1140
 1141 SLRQLRDQPH REVQLSLTST WGSQKKSEVT VNAQLQQSKE QKKYERNMDR QFNGMPEYEL1200
 1201 LIKAARLNQI NAVAEYKLTR ETEQVLARYF DLVKTYNYWT VSSRPENNEN DRVVVQLTVE1260
 1261 PMSRQYVNIT MQSPMERIEL KNVQVPRVYL PSIAQRSVKH QLTEASGSVC KVQKNQIRTF1320
 1321 DDVLYNTPLT TCYSLIAKDC SEEPTFAVLS KKTEKNSEEM IIKVIRGEQE IVAQLQNEEI1380
 1381 RVKVDGKKIQ SEDYSAYQIE RLGESAIVIE LPEGEVRFDG YTIKTQLPSY SRKNQLCGLC1440
 1441 GNNDDESTNE FYTSDNTETE DIEEFHRSYL LKNEECEAEE ERLSEKKNYR KYERDEEQSD1500
 1501 EYSSEETYDY EQENTKKSQK NQRSQKKSDL VEKTQIKEFS HRICFSVEPV AECRRGYEVE1560
 1561 QQQQRKIRFT CLQRHNRDAS RLLKESRQQP LQLDDYPVSF VESVKVPTAC VAY

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