YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE05755
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIYVFFLT LCQILHKIET FEENTEFDVH VETLVNTKNG GDPSFLTKFV NDKGIPQGLK  60
   61 GENYINPSFC SNIDDQVLTD EKYSNCTILQ SKNGSVLKLN FWTNFDTFKF GVNLLELKNV 120
  121 TLELVYQTEL TYLYFTAFRK CEDCLFNFTK NPSLVGLRFW NLAHDPNLEN VPAKHRPKLY 180
  181 IRGNSRLSFT TFTGDRRKLL ELKKACNPEM CVIQNDEECH FRYPIKGSNE YQYCRHVYGD 240
  241 MHFTGTFREN NPAEMKFVIE GCFIFNRTKA QYVRGLLKSF PKCSRQHIFE HNQYMCTDQL 300
  301 DQIKERWGHE KVKIISDGIN VKCYQGECRG GFVSEAVKDR YSGCETFQGD VYLSETSGNL 360
  361 SERIKELSYA HTINGQLLIA NNPSITKLSF PFLKKIKSTK CPALQISNMT NLEFLLFQSH 420
  421 VEFSCRRSGP IVMITNSSKL YLHHQMLRQL RKVKAVLRHF DSKSDTYSEK TTYYLIGGCF 480
  481 VIAIFMEFIW FFRKNLLLPN FLYRLFPMRI NRKPKQKHGK KKKED

Type	Start	End	Confidence
Non-Cytoplasmic	1	471	0.90
Transmembrane Helix	472	492	0.91
Cytoplasmic	493	525	0.83