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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wht-5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKSEEAEP LLKPKNVEDE GLITSLDVDP TQKSRSPTPK PTPIPVLIND TPVASEIEQV  60
   61 EKELAHSSER FRKPKTLSVT NDTESARIPS QVKTNAKKLV FQNIQAVVLK KKGVRQEILK 120
  121 KIDGVARPGE LTFIMGSSGA GKTTLLNILT GRNLKNIETD GDIMINGRNM ISNEMKKLSA 180
  181 YVQQDDVFIG TLTVRETLRF AAKLRSPSAL GATELDSIVD ELLVMMSLKK CENTKVGTMT 240
  241 EKSLSRGERK RLAFACEILT DPPILFCDEP TSGLDSFMSH QVIKALRQLT IEGKTVICTI 300
  301 HQPSTSVYHM ADQLILLSQG HVAYAGPAKQ VDAFFGRCGY PIPKFVSSPD HFMRVISHKS 360
  361 FETEDDYNKR IEKIVLEHDI MKKEQSTHST LSSSRREHPE TAPFTFPRTW TAQFFFIFQR 420
  421 SSIQLWRERS VLLVKLIQTL IMSIMIGSTY YGLEIDKKSL PSFKGFAFVS VQMMHMLFMM 480
  481 PAMTVFWKDY PVVVREFQAN MYSPSAYYLA KTTADSIQYL VFPVIFSGIL LGMTSLPYSV 540
  541 VIITNYLIIN ILLSLNACSV GQSFAAMCGH LATGMTVLPI VCVPLMVFGG FMITYEAIPW 600
  601 YFLPFAWVSW YKYGFEAITI VYFNHNSTIS GCESNSSVAT LKMSIDSNCT TGIEFIKAQA 660
  661 FEETHLWLDY TVILAVILFW KILGALLFTW RIRRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle