YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7507776
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVIGRFSS LSCERASIWC NVSVLCWQEK FMIHFSYKPS IIDCYCVSMQ LMNISQSSWI  60
   61 KCRDWMAFAL SHHIIMGIYL LILRNFLPQV VPDFEWQHYF MRVFIVHIIY IIISYFIRIT 120
  121 RYPPGPPPMA VFGNSPFVNI LTPEQTFLEY REIYGPIFTL HLSQPTIILA EYKTIQEALV 180
  181 KNGQQTSGRS SAESFVLFTG DRLNGDGVIL AMRQKWKDMR HEISRFMNKW YGAPMDELVL 240
  241 HHTRCLEQEL AKIAETKSLI DLRDPLAGAI ANVIQQITIG RNYMYQDQEF QTQLRDINAV 300
  301 VKEIMTAEVF FVNCYPWLRY LPEGILRKWT NYKRSGFRLQ QWFRTILEEH HVNRHQGDFM 360
  361 SHMIDLQESK QEQFRDLSII LTCGDMWTGG METTVTTLRW GIIYLLNNPE VQAKCQMEIL 420
  421 DVFGNDIPDM GKMNQTPYVR ATLSEIQRLA NVLPWAIPHK TIEECNIGGY DIPVNTEIIP 480
  481 ALGAVLFDPN VFESPKQFKP ERFLDEEGKY RVMEEFRPFG LGPRVCLGER IARTELYLIF 540
  541 ASLLQNFRFY LNRGDPIPVA ERVIGGITAP PKPYATRVEY LGNRLIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle