YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dpy-8
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDFYDVAVA SIVLSTFTLV VAVFSVPMLF HKSDNVLLEI SSFSDGIKAK SDLVWNELME  60
   61 IKQGDAVPGI QYFSRKARSN WMGGAFCKGC FLLSCPQGPP GPPGAPGPDG QPGDAGRQGR 120
  121 SGDDGFDIQP ESEPELPCVI CPAGPPGPRG AQGERGMTGN PGMAGMQGTI GMEGVDGGPG 180
  181 LPGPPGPKGE RGPLGPYGPP GDTVVAGVGI KGPLGPPGPQ GMKGPPGPSG KGSNQPGQPG 240
  241 QPGDIGGIGK TGKMGGYGME GPAGPPGDPG MPASYCPSDC GVQPILTEMF PTPFTPTAGY 300
  301 SNMQRPAAPS RPLAHPEYAD GSAPAHLPHS GASDSAAASE VDAPAPHQHR KSHRLRPSHQ 360
  361 QQYGDEQNNA VADAGRSVNA PEYGDGSAPS HMPSHRAHHH PNSASQNYVD PERGSDTAAA 420
  421 DAYANRMHDF QDFERKWRKK LLQRRLRMMK RQ

Type	Start	End	Confidence
Cytoplasmic	1	6	0.73
Transmembrane Helix	7	31	0.70
Non-Cytoplasmic	32	452	0.96