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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: vit-5
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIIIASLV ALAIAASPAL DRTFSPKSEY VYKFDGLLLS GLPTASSDAS QTLISCRTRL  60
   61 QAVDDRYIHL QLTDIQYSAS HIPQSEQWPK IESLEQRELS DEFKELLELP FRAQIRNGLI 120
  121 SEIQFSSEDA EWSKNAKRSI LNLFSLRKSA PVDEMNQDQK DMESDKDSLF FNVHEKTMEG 180
  181 DCEVAYTIVQ EGEKTIYTKS VNFDKCITRP ETAYGLRFGS ECKECEKEGQ FVKPQTVYTY 240
  241 TFKNEKLQES EVHSVYTLNV NGQEVVKSET RAKVTFVEES KINREIKKVS GPKEEIVYSM 300
  301 ENEKLIEQFY QQGDKAEVNP FKAIEMEQKV EQLQEIFRQI QEHEQNTPET VHLIARAVRM 360
  361 FRMCTIEELK KVHTTIYTKA EKKVQLVIET TLAVAGTKNT IQHLIHHFEK KSITPLRAAE 420
  421 LLKSVQETLY PSEHIADLLI QLAQSPLSEK YEPLRQSAWL AAGSVVRGFA SKTQDLPLIR 480
  481 PASRQTKEKY VRVFMQHFRN ADSTYEKVLA LKTLGNAGID LSVYELVQII QDPRQPLSIR 540
  541 TEAVDALRLL KDVMPRKIQK VLLPVYKNRQ NKPELRMAAL WRMMHTIPEE PVLAHIVSQM 600
  601 ENESNQHVAA FTYNVLRQFY KSTNPCYQQL AVRCSKILLF TRYQPQEQML STYSQLPLFN 660
  661 SEWLSGVQFD FATIFEKNAF LPKEVQASFE TVFGGNWNKY FAQVGFSQQN FEQVILKTLE 720
  721 KLSLYGKQSD ELRSRRVQSG IQMLQEIVKK MNIRPRVQQT DSQNAHAVFY LRYKEMDYIV 780
  781 LPIDMETIDT LVEKYVRNGE FDIKSLLTFL TNDSKFELHR ALFFYEAERR IPTTIGMPLT 840
  841 ISGKMPTILS INGKVSIELE KLGARLVLDI VPTVATTHVT EMRFWYPVIE QGVKSLQSAR 900
  901 LHTPLRFEST VELKKNTLEI THKFVVPENK KTTVSVHTRP VAFIRVPKNQ DSEYVEAEEK 960
  961 TISHSQYQMS TEEIDRQYET FGLRINAQGN VLSQWTLPMV LMTEQDFEYT LENKNRPVEF1020
 1021 TARVTIGNLE KTDLSEIKFD KIFEKEFDLE NNESENRRQY FHKMIREIQS EQGFKNLITL1080
 1081 KLEAPQQMYW NTELRTVCDK WIRMCKVEMD ARRSPMEHEN KEWTLRTELL AARPQMPSSL1140
 1141 RQLREQPHRE VQLAFNAKWG SSKKSEITVN AQLEQSTEQK KFIRNIEREY KGIPEYELLI1200
 1201 KAARLNQVNV VSEYKLTPQS EYTFSRIFDL IKAYNFWTVS EKRVQNENRR VVLQLSVEPL1260
 1261 SRQYMNMTIQ TPEQEVELKN VRIPRVVLPT IARSAMFQQT WEKTGATCKV DQSEVSTFDN1320
 1321 VIYRAPLTTC YSLVAKDCSE QPRFAVLAKK INKNSEELLV KVVRREEEIV VKKSDDKFLV1380
 1381 KVDGKKVNPT ELEQYNIEIL GDNLIVIRLP QGEVRFDGYT VKTNMPSVAS QNQLCGLCGN1440
 1441 NDGERDNEFM TADNYETEDV EEFHRSYLLK NEECEVENDR ISEKKNYRNK WNREEKKSDY1500
 1501 ESSSDYESNY DEKETEKELV KKTLIKEFSN RVCFSIEPVS ECRRGLESEK TSNKKIRFTC1560
 1561 MPRHSKNARR FLKEAREQTV AELVDFPVSF VESVKIPTAC VAY

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