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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: twk-8
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVLLRAVGF GRSSNTNRNL RPSSGASGDR LRRPSQMSAG AQSSATRHSQ GDKDKVVQSR  60
   61 IHDQEPEVKE PETWGNRFHR MYKEYHIKYL FPLIFIMFYM LIGAIIFYLL ESGTAEDAAN 120
  121 EEDYKYKRER RLLLLRMEEL VQDTASRRRA YRKKALEEAI DNYEQKLDFA VKNESQWTFM 180
  181 SAMYFAGTLF TTIGYGDIAC ITSAGRIATV IYSCVGIPFM LITLNDLGKF LYNNINGCVK 240
  241 GFEDFTTYLG AFRLCNRRGN GNFQKGDELV TLEAGTTGTT DAPEVSSLAS ELGSERNESD 300
  301 YEDIEDEEER SMPRMSVKVA LGITVGWIFF CSALFKLWED WSYGQSCYFM FISLSTIGLG 360
  361 DVSVQRRDMM VLCFVFVIVG LSLVSMTINV IQVALEDFYV NLIMKLILDY QEKMAAGGDQ 420
  421 MGASVGMMRM WGNNKTAKLL MPLLSKEKKK IAMEKVEVKA KNNGIEVPAI LTDLDEKSGM 480
  481 PKLFHIEENT ENEEPPKILE ELVQKQIEIE EAAAENAVLF VAHDANTQTD ILQQEEKGHQ 540
  541 TDEKQYGEEA VQTEAMQSDN QECETQTEVV HNSIAETQTV IVDYSEADTM TQPVIVNESD 600
  601 MQTDYVQTKE EELQTYIDKN DMETLTEIET KNVRIQTPQP VIEQKCIQTE DLHEDRKSPS 660
  661 KMSSAKKRLR RAFAGKSKPS RNSVEHPVMS DWKDVEESET APDEEEEEEI GSVESLHWDP 720
  721 VDGMHAEKQL PVKKLKAMFD SPKGQRKLER KYSSFNKKRE NSRSRNKSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle