YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03554
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMDLVILIC IFIAVILFAF ACILQKVYKK KTQDRPALRR GKRGSITEQI ELTPINKDDM  60
   61 CIRDNISIGN IPVEIDPSNL KFSSVLENGY FCKIRRGTLN INVTAEEKNS NKLVDVLVKR 120
  121 PKNHIEKEML ENELTILRLI GRHPNVLALI GYTSPMFGRT VVVYESVELG NLQHVLKITK 180
  181 NNFELVGVPE TEFSGLDEFC VSDLHSFAFQ IANGMEYLTH IPVIHRFLAL RNIFLKRNKT 240
  241 IRIANFGLSK NVNDYRIIDS MDTPVPLYWM APESYNELIF NEKTDVWSFG VCLYELYSLG 300
  301 EDPYENVKTL FDHLMEYLEK GNRLSKPKYI DSPEIFDFMK ICWNFKPETR PCFSDCAQFF 360
  361 KSHLQEFPPA LLEQTQSELK LESNIRKL

Type	Start	End	Confidence
Signal Peptide	1	21	0.74
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	388	0.85