YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lact-4
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEKFTITHF LIFLLGFALV IWNSDSGSKQ TEIHVDGEFD PKWKHVADMF RKNLEQNWER  60
   61 SGAAFVVYHK GQKVVDIWGG YSDRESQRKW TKTTLSVAFS CSKAIGAIVI AKLIDEQRLT 120
  121 YDDLVIKHWP EFGANGKQNV TIRWLLTHKA GLAYTDHPIT LEIAKNPNEI DRVLEQQVPN 180
  181 WPPGTKVGYH AVTHGWLVDA IVRRVDKKKR TVGQYFKEEI ADKHNIDFYI GLPLSEQHRV 240
  241 SRIENPNFQN VLDEILYSPR DFDVIRFIKD KINNGTLSKT TVSTPFVQFV GAMTLNNPDL 300
  301 HRLEQAAVLG IGTARAMAEV FELLRNGKIV SDDVKRQMFF ENYEMSEDYI SGAKVPRGQG 360
  361 FMLKEFEHNG NLVKMYGHSG YGGQNIRTDF DHEITIAYLS NGLKVGFGDT ARTYKRLLAA 420
  421 VYDTYFEIK

Type	Start	End	Confidence
Signal Peptide	1	26	0.80
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	429	0.99