YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	atf-2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDSASLSP SSRLSVVCSA SAEFSSSSSD SSNFSEGSPP ESRRNSVNES VIKDEHYWER  60
   61 RRRNNDASRR SREKRRQNDL AMEEKIMLLS AENERLKSQL GTTPIPQPSV TEPPTSLIIP 120
  121 QVAKNLFPAG PIASLQASSM LTVPLLQAAS HIPSMLQLCQ LQPTTIQSPV YASTQQPAST 180
  181 SASSLFSSSS SSAFHPFRPS ESAQQSFPSS SVIVKIERRS PDSSTDVNMP QPQLQPGSSV 240
  241 IQQIGQPAPS GTPQPVIQAV QQGPSLLSAL LSQRRPSPTV PQSRTEHISG LNSPPRHTGN 300
  301 KSDCESVSSS ASFSPSHSSE DHSNYSNKSP QYVDRRRRNN EAAKRCRANR RAVFEYRSRR 360
  361 VQLLEGENED LRTQIETLKA EIAHFKSVLA QRASVVTALH P

Type	Start	End	Confidence
Signal Peptide	1	22	0.53
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	401	0.98