YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE03459
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTARHAVAL LVVLTYAYSS ILPPGTTFVQ SIRDIFRFQE QLKKENVEDT ICSETPPESS  60
   61 IPNRDELLEL IRKSKIEDHK FDEHVRKKRQ LSRISYQEYL DNLGKADYDV RIEEGWTEIL 120
  121 YPFGTWAMDK QLMGQAGRET QTNLGFDCPF FGFRFNYTMV YPMGMLSFGL PPFSAPPWTF 180
  181 PNPAWPKQRD HSFVAAFYAD AMFQWIGNTK ISNVFFRSVH RPRLDDDEVY ERNSQTNYGA 240
  241 PNYQQAGAQS AANQQFSNPS QYSQNLNAYS QNQQYNTQLL QQQQQIYGKR KKRQMPGRVS 300
  301 QPGMVVDPWL LDNITRHIQD GYTGANGFRA EHAFIATWYR MAHGGAARAL DVSQFEHVKD 360
  361 WQNTFQVVLA SDEIRTFAIF NYARLNWTSS NEAGGLDGFG GKQAAMAGFN GGNGTGWYGL 420
  421 PYSGEGRLWK LGYFSNVLTP GRWIHRVDEV IIPAGCTNAS NGGMMTAPPW GPMHGGMAIN 480
  481 VSGPCLRPAD SVKVNFENWQ TSCTRLSRVR ARCIMPMFHK IGLVPIRMSR DGGQSFPFFG 540
  541 KFYVVNSERA PASVSLKDSV DNKTNRWYEP YAQELALGWQ AMNLTWNTGA RVDISLFGYW 600
  601 EDADRSHFER IDYLARGISN TGSYSFRPQQ LTKQFLLRDA WQKFHFGFVQ VALADAEDGV 660
  661 MWSKPTPFPW YHLHEWERYY GRNWPIDMCI EWFEYDGKRN NFQIDLTTDF PCPCKLPQAM 720
  721 LDLGRFMPIM DCDKDGDTSC PFNKGAQHCI QSVQPTFSGS SQQCCYDYDG YLMFTDDWEP 780
  781 DGDYTTFFQP GTPARAHRYG AAPYRLPPFI PTLSNYQLDL NPYRTCCKYA DHCEFYYWRR 840
  841 MTNGCQDYRA PAAGYIYGEP HVITYDGIRY TMPGKGYYVL TMSDSPYHKL MVQVRLEQPD 900
  901 DTLWHAHVNA TVITGVAVQE NDSSIVQVYA RKPMRRWRYR TDVYVDGTRR FFDKPHWKHQ 960
  961 QFKHLDIRNP LQNMNQSEIV IMLKSGVGIR IFEGFGMLDV MVTLPPSYNT TCRPGESLSS1020
 1021 SLNAPRGQRR CYTTLGLLGT YNNDPADDLT TPSGTVTRVQ NPTTTASTTQ MIYEQFASFW1080
 1081 KIDGTNDKIG GVLFQDKFKP IYNPLLFAES DYRPVYWPQT IDMNASRVFT MEQVVSTCQN1140
 1141 NPECEYDFIM TGRKEVGLTT LRRQKEFFAL QKTGSKQLIS CGPLLKKEGV VKTPPAANYL1200
 1201 DGDKVVFSCK PKYYIHGDIE RVCRNGTWSP GWWAWCRDRN LEYALKWMTA LLSIFGISLI1260
 1261 FVIFFCILWN IRKKKQAAHA ERLQLKEQSD RLNKLENERI FGTSPEKTPL IETDFRSNFN1320
 1321 MNQPSRPIPS QPPSSQYSPP VFAAPPPPSQ PTRLPTYTNA ISQQQRQFEP PRPPRGNMRF1380
 1381 ETSAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle