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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pmp-2
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFSKLQLL GQAIPPKQYA PGVVGMLAVF ALIKLYKQDI RGTKHLVAKT KKDGSKGQKA  60
   61 HVDGVFLGKL ARILKILIPG FFSKESFYLI LIAVSLLCRT YADVYMIITS TKIEASIIDR 120
  121 NPLLFALEAF KYVLNLPAIS VTNAILKFGI AELKLRFRER LSTHLYSQYL KGFTFYKMSN 180
  181 LDTRIQNADQ LLTQDVDRFC DGIVELYSNL SKPILDVFLY LFRLGTSLGF SSPSILFSYL 240
  241 LFTGVGLTYL RRPIGRLTVE EQALEGEYRY VNSRLIMNSE EIAFYQGNQS EKETIMSTFA 300
  301 SLVQHLRKII LFRFSIGFVD NIVAKYLATV VGWYAVGSSF FDKQHKPFIG MSRNQLMQEY 360
  361 YNSGRMMYKM AEALGRLALA GRDMTRLSGF TSRVDTLLNV LDDVNSGNYK RTMVGEKEES 420
  421 SALIKSELVA GSGNLRVQDN VIRFDNVPLV TPNGDVLIER LNFEVPSGTN VLVCGPNGCG 480
  481 KSSLFRVLGE LWPLFGGTLT KPAKGKLFYV PQRPYMTLGT LRDQIIYPDR PLDMIRKGVS 540
  541 DSDLEQMLEN VQLTHILERE GGWSAVQDWM DVLSGGEKQR IAMARLFYHK PQFAILDECT 600
  601 SAVSVDVEGA MYRLCREKNI TLFTVSHRKS LWKYHEYSLY MDGRGSYRFE QIDDQSDQFG 660
  661 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle