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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pab-2
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVPPPMTQ VVTSAPPPTA AATVVAGAVA GQPQAVIQQG PPPTNIGYPP NATYSMASLY  60
   61 IGDLHPDVSE AMLFEKFSMA GPVLSIRVCR DNTSRLSLGY AYVNFQQPAD AERALDTMNF 120
  121 EVIHGRPMRI MWSQRDPAAR RAGNGNIFIK NLDRVIDNKS VYDTFSLFGN ILSCKVATDD 180
  181 EGNSKGYGFV HFETEHSAQT AIEKVNGMLL SDKKVYVGKF QPRAQRMKEL GESGLKYTNV 240
  241 FVKNFGEHLD QEKLSAMFSK FGEITSAVVM TDAQGKPKGF GFVAFADQDA AGQAVEKLND 300
  301 SILEGTDCKL SVCRAQKKSE RSAELKRKYE ALKQERVQRY QGVNLYVKNI EEDLNDDGLR 360
  361 DHFSSFGTIT SAKVMVDENG RSKGFGFVCF EKPEEATAAV TDMNSKMIGA KPLYVALAQR 420
  421 KEDRRAQLAS QYMQRLATLR MGQQASGVPA MTQLYQPGQQ GYFVPNPMNA QGRPGFQPQS 480
  481 AQIRGPPGQR VFQNQMFMQY PFNQRQVYPQ QQGRPPMRTN DGRPQYGMAP RPAGAPRVGG 540
  541 PGVQMGGAPI RQQGPAPRGA PQKPFYQGPP RQQQPQQHSQ QPAQQPGQQG QGQSGIVIHG 600
  601 QETLTSHMLA QAAPQEQKQL LGERIYALIE KMFPNHKEAG KITGMMLEID NAELIMMLQD 660
  661 AELFRSKVEE AFGVLTNAQS AAASTSAPTA KN

YRC Informatics Platform - Version 3.0
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