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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sqt-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKLACYVT ASVTVATLMV CFMTMSTIYS EVDGFREKLD TEMNVFRQST NGLWKDIVVI  60
   61 GRSSKRVRRQ YEETNATPTP HADGSPSAPP GQPPAVPPVF NQPKTPNGAN GNGPTCNCNA 120
  121 DNKCPAGPSG PKGVPGVPGL DGVPGLDGVP GVGADDIAPQ RESVGCFTCP QGPVGPPGAL 180
  181 GRPGPRGLPG PRGQNGNPGR DGQPGHPGEQ GSSGQIGKIG EPGPPGEKGR DAEHPIGRPG 240
  241 PKGPRGDQGP TGPAGQNGLH GPPGEPGTVG PEGPSGKQGR QGPDGTQGET GPDGRPGKDA 300
  301 EYCQCPDKSP PSEAVNANRG YRNI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle