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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wht-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFDLLAERK RWNAGYESID TSSQKLTEVV TPITVTWENI EVKTRKKLFS KKQKQLLNRV  60
   61 SGIAKPGEMV ALMGASGAGK TTLMNVLMCR NMKGLEKNGT VKVNGTKIGK EISLISGFAQ 120
  121 QQEIFIPTLT VDEYLMIQAR LRMKANKHTR RERVDEIIEM LRLQNCRDLK IGTPGLVKGI 180
  181 SGGEARRLTF ACELLSNPSL LFADEPTSGL DSFMAASVVQ ILKNLANSGR TLIHQPTAEL 240
  241 FFQFDKIIFL SMGKTAFMGT PHESVKFFAD CGHPIPKLFN PPEWIQSKLS VIPNNETKSR 300
  301 ETIGKIIEFY EKSIIHQKSI VEIRVIATTE LPPYIENPGF FAETGALLKR ACLDVIRSPA 360
  361 QMRMKLIQKV VMGLFIGSLY WQQPLDPRGV RNTNSALYFL IAELTFSTMF GIMTFMEHEL 420
  421 PLIAREYHDG LFYVISYYIS RFLSYLPLFT IDGALMIVIS YWMIGLNSTW QQVAKSILIS 480
  481 VLVEQSATSC GLFLACLFET TSLAIAFAVP ASGLFALLSG LYGNTNNFPV YIRWMQWTSW 540
  541 CRYGFEGLVV NQWSQVDNPK WDPFYRELIL KQFSFNKDNY QLDVIGLCSI VIFFYLAGYI 600
  601 ALFIRIRLSR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle