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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pcp-5
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFISLAIL IATTHCLTLL RDPVTQNGAS KFEKSIGKYK YEEGYLKAPI DPFAFTNDLE  60
   61 FDLRYFLNID HYETGGPILF YTGNEGSLEA FAENTGFMWD LAPELKAAVV FVEHRFYGKS 120
  121 QPFKNESYTD IRHLGYLSSQ QALADFALSV QFFKNEKIKG AQKSAVIAFG GSYGGMLSAW 180
  181 FRIKYPHIVD GAIAASAPVF WFTDSNIPED VYDFIVTRAF LDAGCNRKAI EKGWIALDEL 240
  241 AKSDSGRQYL NVLYKLDPKS KLENKDDIGF LKQYIRESME AMAMVNYPYP TSFLSSLPAW 300
  301 PVKEACKSAS QPGKTQEESA EQLYKIVNLY YNYTGDKSTH CANAAKCDSA YGSLGDPLGW 360
  361 PFQTCTEMVM PLCGSGYPND FFWKDCPFTS EKYAEFCMQT FSSIHYNKTL LRPLAGGLAF 420
  421 GATSLPSASN IVFSNGYLDP WSGGGYDHSD KVQGSVISVI LKQGAHHYDL RGAHPQDTEE 480
  481 VKKVRAMETQ AIKKWIKEKA RNSWRYD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle