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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE00460
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTINYNLAVS TSKPWTLFKL LLKWRGSIWK AVILELAVWL VLYGILSVIY RTALNPGQQR  60
   61 TFERIVQYCD SRLSYIPLNF MLGFFVTAVV NRWTYLYQII GFIDNIGLMA AEYVRGRTEQ 120
  121 ARMYRRNIVR YCELAQVLVF RDISMRTRRR FPTLDTVVAA GFMMPHEKDR FDEIQYKYSK 180
  181 YWVPFQWAFS LTYEARKKGL IESDYYQVVV QDEIKKFRTG LAWICNYDWV PIPIMYPQLV 240
  241 CLAVHTYFLV CLLARQYVVS EHADNKTEID LYFPIMSTLQ FIFYMGWMKV AEAMLNPFGE 300
  301 DDDDFECNAL IDRNITMVLM MVDQGYDRAP DLKRDDFWDE EVEPLYSEET AKIPNNPLKG 360
  361 SVSDVKLPEY VHEIKMVPHC DDASPLVPGD EMRRRRVSVV PVKPSDQQHH HHGHRTRTSL 420
  421 GNIEMFRSFK NKIERSFSKP HLHDDLGRKT FSHGMLENME FEGSNTNIAD GSHANNNSFT 480
  481 NSAFVNSGED LSNKRIDTSS SQPQLATGKR GSEHPFQHHV LDDVLEDDES DENQLTIRKK 540
  541 SSVLQPAITL VERFNEATGQ LETEVKRDEK KKKEEELREE GDNGKEEKDN KEDKKEEQDR 600
  601 PSRPTRPFFI GVVRSESEDH SHPHLRPPTK FE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle