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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ina-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRECIISWTL LLCLSCVKSF NLDVNAPIYR YGPSGTNFGY SVAEHFKGDK PVMLIGAPRG  60
   61 ESGQTGTERA GAMYACDINT FYNGGSNHWC EQVRFEYENV EDYAKRPNET RGRTVHPLGK 120
  121 NDQLLASTIV SKGTKNGSAL VCAPLIRYHQ TAAYPQGACY ELESNLRLQS TYATCAQKNL 180
  181 PTTDRHNEYG GCMEGFSAAI TQDTIVTGLI GAVKWTGGVF AKKSSANIFD SVVEKYTMNQ 240
  241 PNGDMIRTRL VAHDYLGYSV DIGRFGFWYE DGKPITVVSG ATRYGEHGAV IFLPFIQDSS 300
  301 SKLTLNEDKF IINGTAMGSA FGYSIEVVDL NGDGFDDLIV GAPFEHRSGI DGNFGGIVYV 360
  361 YFSQGVQRKQ HESHLVFHPP KILKNPDFYS QFGLSITKLG NVDGDKSKLN DFAVGAPFAF 420
  421 DGAGAVYIYL GTKNIEKFRK KPAQVIKGND LPNLPPGGMR SFGFSLSGGS DMDENGYPDL 480
  481 LIGSPSKNFV ALLRSRPVIS IETKHKMEKR MVDIDKGVNC PRGAKTCFPL DMVIYVDEET 540
  541 KRGAELVDFS SDVFMCNLEA IPFRADTTAR GFIEGSHSHN YSWPCGSNSH VQKRTYRQLI 600
  601 YLPVQESKDW ITPLKFRFTV SIRNEKKPVQ PPQGSQLVDL KHYPVLNKYG ASYEFDVPFN 660
  661 TLCGEDHTCQ TDLSLKAAFK DIPLTSNGYV SNVGEKDYLD LTFTVENKKE KAYQANFYLE 720
  721 YNEEELELPQ VQGSKRMIAE TIGKNIVHLP LGNPMNGASK HQFTIQFKLT RGRTEGIGKA 780
  781 LKFMAHVNST SQETEEELKD NKWEAEVQII KKAELEIYGI SDPDRVFFGG KARAESELEL 840
  841 EEDIGTMVRH NYTIINHGPW TVRNVEAHIS WPYQLRSRFG RGKNALYLLD VPTITTEFTD 900
  901 GTSEVRKCFI KQQYEYVNPA EIKLNTKYST QETAPHRVEH RMKREIDEDE EEQSDDLGAV 960
  961 EENIPWFSTA NFWNLFAIKG GDGRPREVKH LSCQDNTANC FTVICHFDFI DANSAVVIDL1020
 1021 RARLWNATFI EDYSDVESVK IRSFGKLQLD ESQGIDDDPN NNAAFVETSA DPDRPTIGDS1080
 1081 RPIPWWIYVI AAVIGVLILS LIIICLSKCG FFKRNRLDQP SLYTAQLKHE REEWADTGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle