YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC188.09c
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLRFFIFT FFTSIFTVVV SEPPVSAKFA KRVLSATSSS SSTCPEFITI FSEGPSEYIT  60
   61 TIYPSSKSSG RGTTNHSTIY TTINSGTVAS TYTVTLADGD VVVKDIEPTA GTVTTTITSG 120
  121 SHEFTTTLAE ASGTVPGTVE VVEPLAGTVT TTIHSGSVEY NTTLATASGT VPGTVEVVEP 180
  181 AVGTVTTTIY SGSEEFTTTL ASASGSISGT VEVIEPTAGT VTTTIYSGDQ EYTTILAEAS 240
  241 GTVPGTVEVI EPAVGTVTTT TYSGSVEYTT TLVPASGSVS GTVEVVEPAV GTVTTTLQSG 300
  301 SQAFTTTVPA SGSVSGTVEV VQPTGGTVTN TVYEGSQTIT STLATASGTV PGTVEVILPG 360
  361 PSTIYSGTVA TTITYDVSST PASTVVVIPT AVCNGERGLQ YAVYNYDISS SKNQFCATSG 420
  421 VTDVSSFTQP AYFGSSDLDQ SSPLFTGVLS SSDSVPQWTS SYNLPGYPPD ATAMGSTSSA 480
  481 CKVIVYQFFF RVPVTDTFSL DVTNVDDVFY GWFGDKAISG WSNTNYDTYA YWHATNGQTG 540
  541 IASFSMGSLT ADTYVPVRFV VANGAGKGGF DFSFVDSEGN SYNPTSYAYT ATCTESFLPF 600
  601 GQGNGGVDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle