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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: map4
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSYAILLSL FFSFERLLTL ANANSLYSPF NNSSFVDSDT SFSDLSRNGL LSLLDSNTTS  60
   61 ASVQTIAISQ TDNAASCIPS ASLLSSSVVL YSAKETVTVS SYWSLVSTSV TGTVYVPYTS 120
  121 SVACFPYATS DAPNPIPRGD SATSTSIAPT YSASDSSATT ITSSSPSTSI IGTGSTDTSV 180
  181 SSTLTYHTPI ASPTTSSNSD NEYTVDVITS SSLSSFVITN VDSTTTSVIN YIGASTLESS 240
  241 SLTNTVSPTE STFYETKSST SSVPTQTIDS SSFTSSTPVS LTSSSTSSSG SSQDSTTIDS 300
  301 TPSTIATSTL QPTTSSPITT SAPSLSSALP TTYPSSLSTE VEVEYFTKTI TDTSSIVTYS 360
  361 TGVETLYETE TITSSEISSI IYNFSTPISG SSFPDGFKPI NPTSFPSLTS STKKIPSTTL 420
  421 PTSSKMITTT TPSVSNNTQS SFLIISTFTS SYEHSEPFKV SSVPLTSNNF SSISHSSASS 480
  481 LPITPSSYLS NTTLHSSVQS SQSSQFTVSV PSSTQSYSTS SNFTTPITIS TSLSSFPTTI 540
  541 VSSSFQYSSL SSNVTTTNAQ SSSLSSSNSS ALTHISSSIV SSGSSSALSS STIVSSINSS 600
  601 SSVFISSVSS SLQYSSSYVT ETTTSGSVGF TTTIATPVGS TAGTVVVDIP TPSWVTETVT 660
  661 SGSVGFTTTI ATPVGSTAGT VLVDIPTPSW VTETVTSGSV EFTTTIATPV GTTAGTVVVD 720
  721 IPTPSWVTET VTSGSVGFTT TIATPIGTTA GTVLVDIPTP SWVTETVTSG SVGFTTTIAT 780
  781 PVGTTAGTVL IDVPTPTASS SPFPSCNTQC TNENSFRIQV INDDIYPSYV HLDSNNYAIA 840
  841 AARGDSDGEN VFIYDSDIKR IVSCCGVKPI YRLDQDDTEG YSFEIYKDND GQLQFKYPLN 900
  901 DALYPMELLT LTDGRIGITT NLTLYKPYYL NNVENERAAN VVLRALEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle