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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC947.10
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFAPAPRLP SRNGESSEKS IKAEKRAFSE IKNATFLNIP ERVEHSLTFP TEIWETRDGL  60
   61 FEEPVGKGDS HLNHTSVMTG NWNILPYPSF GKVSPNVTWH TTLRNIVMSQ SGRFSANLYE 120
  121 YVDGNSDGIS FVLNLENNND TSVYHMTFHG DRVKPINVFL GSTDVTPNFG GVDVIPWLLK 180
  181 DSPYKDAPPL DGTEYFPLLQ NRSLERIETR LQDAQTVGWS PLVFEEEEVT CSAFVFLHNK 240
  241 NTGLDKETLK AIENEFYHPQ GVSTQKMPEV FVSGLVYSPD CNVAFTFSNT KGPRNFVLEN 300
  301 HLVRFSSLYI FIVLSQIFVL LRQMRINSPS HVQRLSFLTI AMQAGLDAYI AIFFLSTNAV 360
  361 IEKGYLPFVS VAFLSLVPSV MFTMRYLALI LRVQNSNMPP PAPRPVTNNS SNNNTNQSNA 420
  421 SNENSPNAPS AANDNTETTT VNPPQEDDQP MTQHERDQRD WSAVCLRFYF IILVVCIASL 480
  481 YSAFWPVIYR FYFISALIFT SYSFWIPQII QNVKQGTSRS FTWTYILGAS VLRLYLPLAI 540
  541 FIDSELILGF PPKYFFALGL VLWMLFQVLV LLVQDTLGPR FFLPKKFFLS SPVYDYHPVI 600
  601 QQDDLEAFMR DANVCPICMQ PIELVSTGST LNPASMMVRR NYMLTPCHHL YHRQCLLQWM 660
  661 ETRSICPVCR CHLPAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle