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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UCP10_SCHPO
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSRKQEAI DELRNSLDVP ADTAQSVLES FNWDVQEAIE SLTGESSRVD RNSKLGLSFG  60
   61 VFQSVFSLLF SGLHKLWMIL SRVPLISTFI PIFGTTKRVL SPADTANKLV QNLEEQYGTE 120
  121 HIDFFTDGGY MEALTRIKRN YGVALLFFTS SKNDDSETFS RSVLMNQELK EFLNRRNILC 180
  181 WTGDVCEDEA FRGSRQFHCT KFPSAVLVMY SPQLSELVVA AQLHGCLDSS SIITNLTNAL 240
  241 AKHLPSLERF RSEREAREAA RELRRQQDNA YQASLARDRE RQAFARAEEE RLAKEKEERE 300
  301 IVQKKKKQYR AWLASNLPPE PSSEDEPARL SIRFPDGSRA VRRFKKDDTV ESVYNYVDYM 360
  361 LFEKEEPEEF GRATSSSNPV TPPSDYKHDF HFQLYSSLPR ALLKPSVAIS TNKAIFPNGT 420
  421 VVVELDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle