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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC29A10.08
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFTKFTLQ LLSASAAFAY FEPLTIKGRK FFKNDTQFYI KGVAYQPAVD AEETSTIVDP  60
   61 LAEVNYKNCT EDAKIISNLG ANVIRVYAVN ASLNHDKCME AFRNESIYVF LDLANPKTGI 120
  121 DRDTPTWNTD QFSSYQSVID TFQKYNNTGA FFAGNEVVNN ASNAPAVAYV RAAVRDSKNY 180
  181 IKSKKYRTIP VGYAGADIPV VRTELAAYLS CNATKLNNDT NSETDFLGYN MYEWCGHSDF 240
  241 YTSGYAARTQ ELENFTIPIF LSEFGCNKVT PRVFTEVQAI YSDNMTNVWS GGIVYEYSQE 300
  301 VNDYGLVNVS STGERVLTTD YNNLKKQWAS ISPNITYKHS YNPNGTIPEC PSRNKTSWAV 360
  361 SANAFPVTPN TTICSNAVKN LKCSANGTPS GSKISQVLSE LCYYDNKACS SISSDPYEGT 420
  421 YGNYTGCTGV QQLSIALNAY TQDHGADSCS WGGVGELKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle