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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC20F10.07
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEENGFAGF LNTAVNRLSG VLNDTAPTKS QSLKNGVNNE GNRGFSLFRN PRFMSDEKLS  60
   61 SEASSHSTLG QQQARDGRQS PSKEAPFGEG ELKLENFENQ ENEADEAENE ETSYSEQNHT 120
  121 ENTEEIAEES RPLERTHSGS NHHEASSTGH LNLPPLENTL SQGSAITAPS RKVSITSSNG 180
  181 VSARLSGYAF ANSKRNRDFH RIFKVLPPED HLIDDYGCAL QRDIFLHGRM YLSESHICFN 240
  241 SSIFGWVTNI VIPVTEIVSV EKKSTAVVFP NAIQITTLHA RYIFASFISR DTTYQLIIAI 300
  301 WKNTHPFLTT LANGHGVMDA SGNHHSGSSN QSINADSSAG SEGVDEGTST EANDESSEDD 360
  361 DEDNNTDEAN EDAQSNVSDE SPKGEGSSHS DNVVLSDGNS VKKMNEDGAD TSLLSVSEVT 420
  421 SHPPTEWTGS PLAHVLCSDV VNLSVSTVFN LLCGSDTTWI INFFKSEKLT EIKIGKWEKI 480
  481 DDKWNRKVQY IKPVAPPYRQ TSCYITDTIQ HLDINNYIEI LSTTSTPDVP SGTSFVVKTL 540
  541 YALSWAHSSK TKLNISYSVE WSKSSWLKGP IEKGAQEGQA SYVKDLLTAF ENYKVSPKGR 600
  601 RKKITKHTKK KNKHASETSV APEKVDNSSI EQSSSFLTKL YTFPFTIITW LMHPTHLLLV 660
  661 VMFSMLVLQW WYMQQILHAE LPSTSSRSDS SRDLDFDHIP MDDTAFKLWI TSRLDSVERD 720
  721 RDFVYENSDP NLEHGKIKIA TDYMERRLKK LKERLRKLEA SGYI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle