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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC17G6.11c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNVRGDLNR KTPSDGNVNE IGSMYASRDT STSSFTNPTD SSTRLLYNNA SNATFSSAAL  60
   61 AAGVGGTRAS GYTHRFSIRP SSQTYNRYPN GGNSAGSDMY STSPQNNSIV DDIENINKLE 120
  121 AVAFAGPTAG ESDFSLSRED KEIDDFLHYP LPAKDAKKLS YFVGGEGLMQ LLFLLFLAAG 180
  181 TGMLFIGLPI LTYTGHNSLA STRVTGITNH QFRILRLLRY GSLIDPDTPE SAYTFDSQDL 240
  241 GTLDLVFSDE FNYPGRAFYD GDDQFWLATD LHYAATTDYE YYDADTPTTA NGTLRLRMDA 300
  301 FYNHDLNFRS GMVTTWNKLC FKGGRIEVSA SLGGSPYIPG FWPGIWTIGN LVRPGYLATS 360
  361 DGVWPYSYNS CDAGITPNQS DPSGISYLGG QRLNQCVCKG EDHPNVGTGR GGPEIDALEG 420
  421 TFGSGIPYNG SIYLETMPVV SQSAQYAPFD LYMYPNYDFV TIYNQSVSAM NGWAGGVYQQ 480
  481 ALSCASQLNN SWLSGNAYQK YGFDYKPGSG PDALISWFVG DEYTWTMRQP AVGQNGNIAS 540
  541 RPVSEEPMIV VLNFGISPTW IYFYWYELTF PQTMYVDYVR IYQDSSDSSS VLGCDPEGFP 600
  601 TTEYIANHPK AYLNYNATSW SEAGYVRPKN SLMDGC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle