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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAP7G5.03
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSYLSLAA RLSQCWISPW SLCCLYILMQ FFLFTKDLNT KIGDFVNDEQ ATCNYIQEKV  60
   61 DILLDSPSLI ANAAVRVAKD GIQSTVKIIL SGISDSLIAA ENVFIFFIEF SYGTYLCLIQ 120
  121 LAIDGILDAV ADVGEEIGTA VNDTLHAIAD EIEDTVSSLN EVFQSAEDSL EKVASWLGED 180
  181 INLPNVSIPE IQSLRNFTLS SSYDTEFEKL KAGVNFDSAI NATKAAISKP FSSARNLILE 240
  241 KVSNYSFDTS MVSSPNKTHV VVCSTDDLTA ISSFILSSIY KIRKVVIISL LIIIAGLFLI 300
  301 SSIYEIWKWC RIRHKAFLLD EHIRSNKFED TRDLISYIES PISWNLKYFI SALPLPCFLS 360
  361 VQLRWFITYI FHPPAAMILF ISCTSFISGI LQLVLLNNIR EDGSVISALA QNSFHKVESA 420
  421 LANVSVAWAN STNQIILKNQ ENINNNMFGS IHNTTLSLNS TLNTFMNELN SSMTSAFGDT 480
  481 FLASTVQNVM NCLLYRKIEN FEEVLTWVYN KSHIELPLLP TDILSKSIDN QTIYSSLYSS 540
  541 LNSSNSTVSF SGIFDRVEKS VISELNFSFL FFLLWLLICA FGLIGVLSSW LKSLFLSLLD 600
  601 LVIPNPKENI TLPVQSLAFP VTKSCRPPPI PPRESHVYDF QNFQYEEDDC IDYKRSLGLI 660
  661 SLSSDLAIDI PISPAIISDI QFNSITTESE ETTYLLKEKQ DRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle