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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ZAS1_SCHPO
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNEESFTEK PLKKRSRAHR LGDPRFYCTY PDCPKSFTRK EHLRRHERTH ENVKAFSCSF  60
   61 CNRAFARSDV LNRHVQQMHL QKQNLSERRM LNASCFLGFC VLAHDYVNLI NARHFMIEHF 120
  121 LSLFAFCRTI LFSLLTSFLL VPPPQFFHSE AGERPTPSVG APSSLASSMD SVRVAPSMLA 180
  181 ASHQIVPQYS ENNPRVSNEP PRVTIENASL KPFSGYIKSH MSTSNFLNGE PDLNVNVDLS 240
  241 PFPNLPATVP ITQAASTANA FQQPSNQFQT QKLPSGLDTR PVSSYPDELT QLESNPDSFS 300
  301 RLDLQGDCTC IFKNRSSIAS SRTMDDVVRW LFSSGKRRQK YESSYPYQTQ SNQIPSQDQY 360
  361 SDTDSNFLSY YFSASGPMYV PQKCPATVYN NLLNFLEGSF HLQPNFLAMF TLESVSSWLN 420
  421 AYWSMFHVRW PILHRGTFQI TQAPLDLLLS MITLGMHSSN DLSIRSLAVE IHTTLRYNIY 480
  481 QKQEFGPPVS LWVYQALFLI QVFELFTSNL KQHRLAQMFH PVLIEAMRQA IPSDALTVRS 540
  541 ETFGESNTPL TLQQWHKWIT RESVKRIAFF VFALDSTSTL VFGNQPLLYV TDVSMPLLAE 600
  601 EHHWEAENFE VWAAQKPTIE PPTILHMLKA FVQCEQCESP LPKLSPWNML LLLHGLLSVD 660
  661 ISLKQKKFVP GMKLSKREID GWCSLVFEAY QKWNRCYYSI FLNNNILPFG HPFVKECRSL 720
  721 YNLACIYSKT RLTYLQAFAK AVTDPVDGSV TSKTVAPLRY VKIWANTENA RYSTSNALEI 780
  781 LDMLLREKIE SAPRYDTLIY HSWCYYVAAL VLWSIGFALD EENKKTEEVT NLHSQMSRYV 840
  841 TKVRQALEQG EPLFAVVEKS KNPIILHVVL QALDVFPWDL LGEHKKIIQQ LLSKGND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle