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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TYW1_SCHPO
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYSLGYIGE HWEEYRAVLY IVLLLPVLIH FLIRRKTQLS NSDKSSEKKD EVKKQREVKR  60
   61 FKRVGKRGKI GSPSSSIRKQ NDTIDWKNSP LCVFYSTLGG TAERYAKQVH EELSSLLQRD 120
  121 DIQLLNLDYV DLSEYFVSCP ENAIYLVVLP SYEIESSIDY YLSSLQESFS DFRVPKDPLH 180
  181 GLSGYAVFGL GDMENYPGDK FCYQAIQADK WIKKLGARRL APLGVVNTQL APTAQIDALL 240
  241 QWTRSVAECL KNGTLLKIGN TDSLSSDVMD VEDMGSMMAK AKAEAALPVG TKEMVSTESP 300
  301 TYKALTKQGY SVVGSHSGVK ICRWTKSAMR GRGFCYKYSF YGIRSHLCME ATPSLACANK 360
  361 CTFCWRHGTN PVGTSWRWKV DPPEMILQGI LKAHYAKLKL MKGVPGVLPD RYEEASRVRH 420
  421 CALSLVGEPI FYPYINEFVS MLHEREISSF LVTNAQHPEA LRNMGMVTQL YVSVDASTKQ 480
  481 SLKSVDRPLF KDFWERMLTC LEILREKRQR TVYRMTLVKG FNMEQIKEYT ELIRLGVPCF 540
  541 IEVKGVTYSG NSDQSPLTMK NVPYYEEVID FVKKLIEYID IHLQDLGVRY EIAAEHAHSC 600
  601 SILVAQTAFK KDGHWHTHID YPKFFELIRT KKDFGPFDYM ASTPDFAMFG NGGFSPEDTR 660
  661 FHRKKKTQTS KPISATISET ATISEAAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle