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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC24C9.08
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSNDPVVS SHDPIKQEKE QETDLEAQVE HKKRNERGNA FVGFLILIFV YYLLRGGSND  60
   61 NDKQEMSHSP GSCMDSESAA VSTSAKCYIP PVLTPAKEPK LGDDVSGIDY IRSPEFFNDS 120
  121 LVRFQELLRI PTVCYDDMGD VGDDDRFDIF AVFQDKVREL YPNIFKKLKV EYVNTYGLLI 180
  181 TLEGSNKDLK PLVLMGHQDV VPVNQASLDR WYFPPFSATY HNGHVYSRGA ADDKNSVVAI 240
  241 LEALEILAIS DYKPEQTVIA SFGFDEEVSG YRGALPLAHK LYERYGKDGV ALILDEGGFT 300
  301 INLFGTLFAT VCVAEKGYMD VHLKLKTPGG HASIPPPHTN IGLMSKLVTQ IEEPFGGELT 360
  361 FENPFYTTLQ CFAENSADMD DNLRQLIKSG DTEKMTDLFS KSRLYRYFFE TSIAVDVING 420
  421 GVKVNALPEE TTLAVNHRVD ASKGLKQVYD RYGGLLEEFG HEYHVNVTLF NGETVVEYED 480
  481 AIGHIFASTA KTLEPSPVSP YDESSDAYKK LAGAIRYTFG DGTSVTPALM PANTDTRHYW 540
  541 NLTSNIYRWT PVSTNSTSKN SFNGHTINEN MRYDAHMDSI EFFYNFILVS DSGEEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle