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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pep1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFLTKILPL RGRIFPMFGC LLLIVSLITG CIASPAAEVA ETVFDSKPVD FMTFKDSTNT  60
   61 LFLNAEFGDV YLSQDNGQSW RNGVISGQVC PIKKLIKHSF ENSRVFALTE CDTVYYSYDN 120
  121 GENWDYFTID HPISITQLPF HFHAKNPDYV IFNNQYCSSS GTWVGKICKP DLYYTKDGFQ 180
  181 SDPEPMPVGS SYCIFADSSE KMVVSSEEQI ICISLNPNSA ARPPFSHHIV YSDDWFQSIV 240
  241 PVQLHNFLGS DGAYGILSTG SFLVAALIDA ATRKLFVYVS QDGYYWEEAL KFHKGFEFDA 300
  301 FTILPSTEYS FFIDSLDSHP NNPTGILYSL DSESNTFVIR QMNTNRYVDG YTDFMLIDYL 360
  361 DGLQFVNVVE NVDEIEVDPQ VDKVLSSRIT FDGGKTWSTV ASPESSCNSM KQCSLHLFLD 420
  421 PHVSHASIAS SKFAPGILLA SGSVGDRLLS ENQMDLFVSE DGGRNWTLSR DGMHLFAMSG 480
  481 FGSIFFASEY LDVINEVYYS LDHGQSWVTV TLDKTIVPIK LFASEDPYAE IFYLLAMTDD 540
  541 GEQSNYSLFS FNFGKFLPKE CQFSNSESNK NDFEKWYTRY ANGSPICSEM GKKEFFWRKK 600
  601 ATSVCSVPKS ITDLHGSFDA CECTDEDYEC NTQFISNDQG ECKLLDFIGS LLCASEDLDT 660
  661 FQKIPYRLVP GNKCTPNKRD SHREPQTFNC DSFNEPGTEI TSFLYDFDEK IVDVVYLEGT 720
  721 VPEENTFLIG ISVNSHVYFS EDEGKTWDKF SKEEFSSVLP HAYNKNSVYM VTSKNIVYFT 780
  781 TNRGKNFYKF KAPSPPNQNG KSLFSFHPSR PAWLLYAGSE NCEKNPFADD CRDVVFVSLD 840
  841 FGDTWSRLPS NLEYCSWAKA EKLVVDDTLI FCIRQNTNDP FKKELISSID FFEYEQDEIL 900
  901 NDVVGFMIED EYVIVAVQDE EGTSLSLDVS INGLNFASCS FPAYLNVHPK QAYTILDSQT 960
  961 HSLFIHVTTN THLGSEWGDI LKSNSNGTYF MTSLANVNRD SVGYVDFERL EGIQGIALAN1020
 1021 IVSNTKELTD GGTKKLQTLI TFNDGLDWSY LNLVGGEKIV PKCGKNCYLH LHGYTERNQF1080
 1081 SDPTSTNAAV GLIIGVGSFS PFLIPYEESQ TFISRDAGVT WYRIFDSPHL WAFLDSGSII1140
 1141 IAVESISPTN VIKYSADEGR TWQEYQFSEK SKVVVDVSTK PSGVGHQVLL LTTDDENAPI1200
 1201 SSVLIDFDAL YRRTCVFDEE NSEESDFVRW VPTDISGKPL CLRGRISSFY RKSIHKKCRV1260
 1261 GSSLLVKEEV LSKCECTRAD FECDYNYRRL KDGTCVLVSG LQPPDTREEQ CSVDDAFEWR1320
 1321 QPTGYKRTPL TECEGGVPLD AGTLHPCPGK EDDYYKAHPK PGGWSIFLTI IFSILLAAVA1380
 1381 GCILYYYSRR FLKGAIRLGS DSATENPLES GISYTRGAFS SIPIFFSALY QSVRSLFIRS1440
 1441 TPTNGEFENA AFLQNYEIDD DDEESV

YRC Informatics Platform - Version 3.0
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