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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC16G5.09
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKLLKIVL LTAGVIGNTL ADSRIHEQYL VKAFPNEPVD YEGRMHAGHL NQTDQLDGDL  60
   61 FFWMFESVKP EYEHRSILWL NGGPGCSSED GSLMEVGPFR LDDNNTFQLN PGRWDELGNL 120
  121 LFVDQPLGTG YSYSLAKDFQ SNNEKMANDF SIFFEKFLEE FPERANDEWF IAGESFAGQY 180
  181 IPHIAAKLKE KNLVNLGGLA IGNGWINPLS HYETYLNYLV EKGMVDFESE LGQYLHHSWA 240
  241 ECLLAFDKIG SGSGDLSKCE SFLGDILYMV SKEPGKACMN MYDISLESTY PTCGMDWPYD 300
  301 LSYLTEFLST REAMTSLNVN LEKVHDWEEC NDDVALQYAR EGIESSSKLI QDLVSTVPIL 360
  361 LFYGENDFLC NYLSGEKLTR SLEWNGAVGF QNQSAQPFYL PGYSDQPSGS YVSSRNLTFA 420
  421 RIVEASHMVP YDHPNEMKTL ITAFFNNDFA SLPSVPKPSP DLGNGNYKWL YLGLIPVALT 480
  481 IIILFSIYLC RRFGLFGLSK QRYQPISPTP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle