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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YEE2_SCHPO
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPANASSK KDHVIPVLLN ECSIDSPSFR ASMYYLGNQI KAFNEWSHDF LCCCNKFIES  60
   61 IMAIEPIVAS MSLNAMPSNV ASGFFDPDYA TTALLHGQDL FRSSYMVQLQ QAKNLRKFIV 120
  121 APLDLFRDSK VKPLLQLNDR FKAEQAKYDA EVLRYSSLGH SKDLSQMRDE AKSLYEARKS 180
  181 YFTVALQYVV RVTSFRSSID FIVIESICKF SIETFRLTDR LHESNRHIND QLIRLLSYET 240
  241 KLKESYPSLK RIVSNVFDRI EKEILKRVQP PTNLDAYRFD PQQICQTNAT KRQGWLLRNI 300
  301 SSSKADNKAI WRKYWFFVDN GYVGYLINDA NGGVFESEKI GVLLCKFSVL PSNHRKFCFQ 360
  361 IKTKSVSYIL QAETHMEMLE WGSVINNARE HCINSGISAN RILSPTLPSF SAKATSIINP 420
  421 QVNGRSNSTG KIGKNYRPRR TYSGRLLCGP NNYEVSTIMR SPTISTVPPP KYLSNSINGA 480
  481 KFLNPLAPWT LVNAPLITNL THETITSLLD QEAFFHGNSP CALLANFWGS VNYGHVLERQ 540
  541 NVYIEDLSNP SYKRLAREIH IEKLPSELKL RNAEFRGIFG ESEASTVLFV CRVCSKREDQ 600
  601 IRMPGRMYCT MKGIYIYYNI NGLVLIEHFP ISSILNVKQF ASTKCDYFYM NIQNIGTVRF 660
  661 RLYLDSSKAL TDRLNVLLCN YIADKPNSSI QLLSCIKRLN DDVKRFERGG DDNALKSYGV 720
  721 QPSQEDLLIR RGRSSRALTN LINKNESNDS FMEDLRDFKI AMLPKETVQV VRSHHLDDIV 780
  781 FDRVYNVSTK ALFHIVFGDR STVLSGAYNL HGVDDVEFLP WGKDPKTNLS RRYINYKVYN 840
  841 YDQEGQCQSY HYEDCQIMDV RNDYHLYIMT WLHHSWTLPY RDYFKIVTKT SISHLRREKS 900
  901 RLLISVGLEW IVKPFAISKV IEAECRKLAI KYIKTEVNFL EKATRRARNQ PLIAIINQYG 960
  961 RVGDYNESMV YRRKIPFNCE LKNLSIIDII RNNWWLFLQG LAIDLLKLPW AVFHIFLRYL1020
 1021 FSHSFLVIIF ACSVILNLSL MFCFGAKYWD ERQNNKFVGQ VFDEFKNIET SARYVYMKDV1080
 1081 DDLLVGLPTY LHPNVTYPSE CLQSFALKSS PQKSHWLRKR NYIAEKRKKI LENLASLNYY1140
 1141 EYIIHEDAVY QYIQQELLGC DKAREFDLYP PSMQRYCDSC TQDWRNRTLF FGKDTLATRL1200
 1201 LTLETVENAD YAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle