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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC19G7.07c
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKCSGSLT LLAVRRFCGP CRRLHYHKDN PNNINIAKNL LNNNIQARCS TNEASWKLAQ  60
   61 KELDLKIREY EQKLKDVKLN DINKKSPLNI PDEVWTKFIS EVNSYDKEKE NHLSTGNHEL 120
  121 RRTTPLKIGP LLLTRIGLLK SKNTASNNYS VDHIVSNLAN DNTLLNRQVS TEEWNSHLRH 180
  181 LLNIPKCFLG VDIVEIVNFF NYLPQTVISK SSLEIWKAVE ESGMKVMPDL LVLLMESTNA 240
  241 SGDFRKTVQL YHLYQKSNAP PNGLVYQSYA IALSSLGKHK DLVALYSEQK SVSITPSKDF 300
  301 LNACIKAFSR TKEFTKAWEV FNFMKFTATS ISPSAETYGL MIQICSSQYN PEKALDLYNE 360
  361 MKLRPIDPLT PTTFVINNLI HALATDVRFQ TVAFSLLQDL SHYGLRPNHS TLYELIRLIA 420
  421 YSGKLDYMKD ILDNFWVRQK LLPSILKVEQ IFHFIFRALI SAEVQTSSVT PDYTHFKEEV 480
  481 RKIIDSSKEP LIPFLKRSTL TENDLFLNAI YTFEYAKRKF PEALNSRLVT DFLNIFLERG 540
  541 SVQLFKEIYQ LEFREMSTME GSSMKVAKIT LTYIYAIKLA LLFNDFEFGY AAWQEYWHCK 600
  601 IHKLLPKEDA SYEQKVVLLT LSLLSKNKHT SLARSLLLSH LDKGWTWNKH SLGFMRKMCS 660
  661 VMNDQATVYL IDSITNEIGI NQRFTRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle