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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC23H3.11c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGHSDLPR QPERVAQNPF LTFDQDSFPS SYGSSLNVSE QTSGSSSTSP LPQISCLLRK  60
   61 DDVPLANKEL SRSLIHVQEL SRYPPFYNQD HQHLGVPRSR VGSDVWKMRE KSFLSPSQFS 120
  121 SIDLSWVYRS KEEDDDFHDP KSSVVSLMGE EDYLGWSRFC DLFFLFVLSL GIGLLFIVFP 180
  181 ALTFTGNITP SKEKFDAIMA NQITDHLFAH MRVPRTNLID KDTPSTAYHR TGYNGRKYNL 240
  241 VFSDEFNKEG RSFYSGNDQF WEAVNIHYAA TNDLDWYDPD AITTVNGTLA IQLDAFWNRD 300
  301 LNFRSGMLQS WNKLCLKGGI IEVSASLAGS GEHAGLWPGI WTLGNLARPG YMATTDGVWP 360
  361 YAYSQCDVGI TPNQSSYDGI SYLPGQKLPN CVCLNEDHPS PGVGRGAPEI DILEGSTEKL 420
  421 HPDDELDIGV VSQSGQFAPF DFFWLPNYDY LAVYNDSITH MNSYVGGPFQ QALSGITTLN 480
  481 NTWYGGNAFQ IYGFDYKPGE GTNGYVSWFV GPNYTWSMLG SAVGQNGNVG PRQISEEPMS 540
  541 IIFNLGISNN WAYYYFRDLS FPAVMYIDYI RIYQDPDDTN SHIGCDPPGY PTTKYIEEHP 600
  601 LAYKNPNATT WEMAGYTWPK NSLMHKCNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle