YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC589.09
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRLWVRCR CSTALSAAAA GTFFFRRSQK QPEPETVDEK VSFESYSPLK LMIQKTWPRF  60
   61 QEHKEYRESF IRLAKCDSPD AILVRFLASC NNDSHEASQK LINTLQWRVD TGVERIVERG 120
  121 ELYAKETNDD QFLEQLRTGK VTMLGRDLSD RPICYIQVHL HQPSKLTQNS LREMTVWVME 180
  181 TMRLFLRPQK TLKDSMDSPQ NVNVLFDLSN FSLHNMDYSF VKYLASCLEY YYPQSLGVCI 240
  241 LHKSPWIFRS VWNIIKGWIK PEIAAKIVFT QSANDLEKYI DYSVIPTSLG GGNKKIFQYI 300
  301 EPVEHENDAV IEDSAEKTAA LARYYAYFSE WEQHSLNWAK LDDDDAQNEK VRLCCDAAGT 360
  361 NFANCYWNVD KYIRARTVYD RLKWIGNV

Type	Start	End	Confidence
Signal Peptide	1	28	0.82
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	388	0.99