YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC19A8.06
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVCSCLLP TPSTDFVNQR NMPIPIIAHI AQFKYEHLIT HWAQYTKAAI AVSTIAAFKF  60
   61 WTSGRTTTWE RKMNGMVVMV TGGSSGIGQV VVEKLASLGA QVVILLRTEP DQFTVDYIMD 120
  121 LRKRTKNQLI YTEVCDLSSM LSVRKFATKW IDCTPIRRLD MIVLCSGVLL PPFMDRQTTE 180
  181 EGVELQWATN FLGPYQLLRI LRPVIYGQPG HREVRIVAAT CSSYILGNID FNDLDLSNHP 240
  241 YPRKSPWKVV GNAKLALMTY LYDFQKKAEA HERPDKMPCN LHTIMANPGV VRTPGFRRVV 300
  301 SFGKVWGLFL YLLLWPFWWL LLKGTIHGAQ SFFHAICSPE FASITQPVLV NECSIVEYSR 360
  361 KEITDPEFAE KLIKAADAQI DEVEKQYKKK KIKKSKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle