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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC222.14c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTASNRVST QIVDEHKQFN NELPKFMQSV GLLDAGFNYH VVAVLGSQST GKSTLLNNLF  60
   61 GTSFSVMDAS KRQQTTKGIW LSKANNSPIL VMDVEGTDGR ERGEDQDFER KSALFSISTS 120
  121 EVIIVNMWEN QVGLYQGSNM ALLKTVLEVN LQLFHNKKER CLLQFVIRDF LGNTSMENLA 180
  181 DTIMTDLNNI WASLSKPEGF ENSVINDFFD VGFTGLPHKI LCSDAFSEAV DSLRERFVDN 240
  241 NNSDYIFNVS YHKKIPADGF SLYTREIWDT IENNKDLDLP TQQQLLAQYR CDEIITEVME 300
  301 PFSTACTILQ KEFLPGNLCK DLPTKLLNMF ETVIEAYDRQ ASRYNVHIYQ KKKQELIASV 360
  361 DSHLYVFFQA QLNALHKELI KSFFDASNEF PSDTPFKESS SIKINELVNK MREEGESLSL 420
  421 PHVHWDVDPF ILKLSEELTQ NSETLCKEKL KEKLEELFTG FEFEVSEAVE VAFQKLSHNV 480
  481 WDTLLNEFLA AQNTTIEKIK NIVPFYVDID DTKTTEEYII NFKKNSWLFF RKKIDSEMSE 540
  541 VLLQQRLRVY FEELFRYDSD GMPKLWKKSG TIDRDYRESL TKTLDLINVL ASIKVSDGNY 600
  601 PDLNVDIKTL EPEYTSPASF FTILNRRRVS DISVNFKRSA DLIFMDCKRS VINTTTRIPP 660
  661 YFWVLLIVLG WNEFMAILRN PFVFMILMFG GTVVYGLYIS GLIWPAKMVL ERATNNLVDL 720
  721 ATDRFSNTYQ EQVQQRAMQR TEKSGSPVAS ADDAEAEKTA LS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle